fix(mge/data): process mnist without generate new files

GitOrigin-RevId: 44a697c3fe9197bf6ae8889afc0df72d6095cf1f

python_module/megengine/data/dataset/vision/cifar.py

@@ -78,7 +78,7 @@ class CIFAR10(VisionDataset):
             else:
                 raise ValueError(
                     "dir does not contain target file\
-                        %s,please set download=True"
+                        %s, please set download=True"
                     % (self.target_file)
                 )
 
@@ -108,7 +108,7 @@ class CIFAR10(VisionDataset):
 
     def untar(self, file_path, dirs):
         assert file_path.endswith(".tar.gz")
-        logger.debug("untar file %s to %s" % (file_path, dirs))
+        logger.debug("untar file %s to %s", file_path, dirs)
         t = tarfile.open(file_path)
         t.extractall(path=dirs)
 
@@ -117,13 +117,13 @@ class CIFAR10(VisionDataset):
         label = []
         for filename in filenames:
             path = os.path.join(self.root, self.raw_file_dir, filename)
-            logger.debug("unpickle file %s" % path)
+            logger.debug("unpickle file %s", path)
             with open(path, "rb") as fo:
                 dic = pickle.load(fo, encoding="bytes")
                 batch_data = dic[b"data"].reshape(-1, 3, 32, 32).transpose((0, 2, 3, 1))
                 data.extend(list(batch_data[..., [2, 1, 0]]))
                 label.extend(dic[b"labels"])
-        label = np.array(label)
+        label = np.array(label, dtype=np.int32)
         return (data, label)
 
     def process(self):
@@ -153,7 +153,7 @@ class CIFAR100(CIFAR10):
         coarse_label = []
         for filename in filenames:
             path = os.path.join(self.root, self.raw_file_dir, filename)
-            logger.debug("unpickle file %s" % path)
+            logger.debug("unpickle file %s", path)
             with open(path, "rb") as fo:
                 dic = pickle.load(fo, encoding="bytes")
                 batch_data = dic[b"data"].reshape(-1, 3, 32, 32).transpose((0, 2, 3, 1))

python_module/megengine/data/dataset/vision/cityscapes.py

@@ -71,7 +71,7 @@ class Cityscapes(VisionDataset):
             elif k == "mask":
                 mask = cv2.imread(self.masks[index], cv2.IMREAD_GRAYSCALE)
                 mask = self._trans_mask(mask)
-                mask = mask[:, :, None]
+                mask = mask[:, :, np.newaxis]
                 target.append(mask)
             elif k == "info":
                 if image is None:
@@ -109,9 +109,9 @@ class Cityscapes(VisionDataset):
             33,
         ]
         label = np.ones(mask.shape) * 255
-        for i in range(len(trans_labels)):
-            label[mask == trans_labels[i]] = i
-        return label.astype("uint8")
+        for i, tl in enumerate(trans_labels):
+            label[mask == tl] = i
+        return label.astype(np.uint8)
 
     def _get_target_suffix(self, mode, target_type):
         if target_type == "instance":

python_module/megengine/data/dataset/vision/coco.py

@@ -139,7 +139,7 @@ class COCO(VisionDataset):
                 target.append(image)
             elif k == "boxes":
                 boxes = [obj["bbox"] for obj in anno]
-                boxes = np.array(boxes).reshape(-1, 4)
+                boxes = np.array(boxes, dtype=np.float32).reshape(-1, 4)
                 # transfer boxes from xywh to xyxy
                 boxes[:, 2:] += boxes[:, :2]
                 target.append(boxes)
@@ -148,17 +148,21 @@ class COCO(VisionDataset):
                 boxes_category = [
                     self.json_category_id_to_contiguous_id[c] for c in boxes_category
                 ]
-                boxes_category = np.array(boxes_category)
+                boxes_category = np.array(boxes_category, dtype=np.int32)
                 target.append(boxes_category)
-            # TODO: need to check
-            # elif k == "keypoints":
-            #     keypoints = [obj["keypoints"] for obj in anno]
-            #     keypoints = np.array(keypoints).reshape(-1, len(self.keypoint_names), 3)
-            #     target.append(keypoints)
-            # elif k == "polygons":
-            #     polygons = [obj["segmentation"] for obj in anno]
-            #     polygons = [[np.array(p).reshape(-1, 2) for p in ps] for ps in polygons]
-            #     target.append(polygons)
+            elif k == "keypoints":
+                keypoints = [obj["keypoints"] for obj in anno]
+                keypoints = np.array(keypoints, dtype=np.float32).reshape(
+                    -1, len(self.keypoint_names), 3
+                )
+                target.append(keypoints)
+            elif k == "polygons":
+                polygons = [obj["segmentation"] for obj in anno]
+                polygons = [
+                    [np.array(p, dtype=np.float32).reshape(-1, 2) for p in ps]
+                    for ps in polygons
+                ]
+                target.append(polygons)
             elif k == "info":
                 info = self.imgs[img_id]
                 info = [info["height"], info["width"], info["file_name"]]

python_module/megengine/data/dataset/vision/folder.py

@@ -19,6 +19,7 @@ import os
 from typing import Dict, List, Tuple
 
 import cv2
+import numpy as np
 
 from .meta_vision import VisionDataset
 from .utils import is_img
@@ -78,7 +79,7 @@ class ImageFolder(VisionDataset):
     def collect_class(self) -> Dict:
         classes = [d.name for d in os.scandir(self.root) if d.is_dir()]
         classes.sort()
-        return {classes[i]: i for i in range(len(classes))}
+        return {classes[i]: np.int32(i) for i in range(len(classes))}
 
     def __getitem__(self, index: int) -> Tuple:
         path, label = self.samples[index]

python_module/megengine/data/dataset/vision/imagenet.py

@@ -93,7 +93,7 @@ class ImageNet(ImageFolder):
         self.devkit_dir = os.path.join(self.root, self.default_devkit_dir)
 
         if not os.path.exists(self.devkit_dir):
-            logger.warning("devkit directory %s does not exists" % self.devkit_dir)
+            logger.warning("devkit directory %s does not exists", self.devkit_dir)
             self._prepare_devkit()
 
         self.train = train
@@ -105,8 +105,8 @@ class ImageNet(ImageFolder):
 
         if not os.path.exists(self.target_folder):
             logger.warning(
-                "expected image folder %s does not exist, try to load from raw file"
-                % self.target_folder
+                "expected image folder %s does not exist, try to load from raw file",
+                self.target_folder,
             )
             if not self.check_raw_file():
                 raise FileNotFoundError(
@@ -117,8 +117,10 @@ class ImageNet(ImageFolder):
                 raise RuntimeError(
                     "extracting raw file shouldn't be done in distributed mode, use single process instead"
                 )
+            elif train:
+                self._prepare_train()
             else:
-                self._prepare_train() if train else self._prepare_val()
+                self._prepare_val()
 
         super().__init__(self.target_folder, **kwargs)
 
@@ -145,12 +147,12 @@ class ImageNet(ImageFolder):
         try:
             return load(os.path.join(self.devkit_dir, "meta.pkl"))
         except FileNotFoundError:
-            import scipy.io as sio
+            import scipy.io
 
             meta_path = os.path.join(self.devkit_dir, "data", "meta.mat")
             if not os.path.exists(meta_path):
                 raise FileNotFoundError("meta file %s does not exist" % meta_path)
-            meta = sio.loadmat(meta_path, squeeze_me=True)["synsets"]
+            meta = scipy.io.loadmat(meta_path, squeeze_me=True)["synsets"]
             nums_children = list(zip(*meta))[4]
             meta = [
                 meta[idx]
@@ -159,8 +161,8 @@ class ImageNet(ImageFolder):
             ]
             idcs, wnids, classes = list(zip(*meta))[:3]
             classes = [tuple(clss.split(", ")) for clss in classes]
-            idx_to_wnid = {idx: wnid for idx, wnid in zip(idcs, wnids)}
-            wnid_to_classes = {wnid: clss for wnid, clss in zip(wnids, classes)}
+            idx_to_wnid = dict(zip(idcs, wnids))
+            wnid_to_classes = dict(zip(wnids, classes))
             logger.info(
                 "saving cached meta file to %s",
                 os.path.join(self.devkit_dir, "meta.pkl"),
@@ -208,11 +210,11 @@ class ImageNet(ImageFolder):
         assert not self.train
         raw_filename, checksum = self.raw_file_meta["val"]
         raw_file = os.path.join(self.root, raw_filename)
-        logger.info("checksum valid tar file {} ..".format(raw_file))
+        logger.info("checksum valid tar file %s ...", raw_file)
         assert (
             calculate_md5(raw_file) == checksum
         ), "checksum mismatch, {} may be damaged".format(raw_file)
-        logger.info("extract valid tar file.. this may take 10-20 minutes")
+        logger.info("extract valid tar file... this may take 10-20 minutes")
         untar(os.path.join(self.root, raw_file), self.target_folder)
         self._organize_val_data()
 
@@ -220,7 +222,7 @@ class ImageNet(ImageFolder):
         assert self.train
         raw_filename, checksum = self.raw_file_meta["train"]
         raw_file = os.path.join(self.root, raw_filename)
-        logger.info("checksum train tar file {} ..".format(raw_file))
+        logger.info("checksum train tar file %s ...", raw_file)
         assert (
             calculate_md5(raw_file) == checksum
         ), "checksum mismatch, {} may be damaged".format(raw_file)
@@ -238,7 +240,7 @@ class ImageNet(ImageFolder):
     def _prepare_devkit(self):
         raw_filename, checksum = self.raw_file_meta["devkit"]
         raw_file = os.path.join(self.root, raw_filename)
-        logger.info("checksum devkit tar file {} ..".format(raw_file))
+        logger.info("checksum devkit tar file %s ...", raw_file)
         assert (
             calculate_md5(raw_file) == checksum
         ), "checksum mismatch, {} may be damaged".format(raw_file)

python_module/megengine/data/dataset/vision/mnist.py

@@ -8,7 +8,6 @@
 # "AS IS" BASIS, WITHOUT ARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 import gzip
 import os
-import pickle
 import struct
 from typing import Tuple
 
@@ -48,14 +47,6 @@ class MNIST(VisionDataset):
     """
     md5 for checking raw files
     """
-    train_file = "train.pkl"
-    """
-    default pickle file name of training set and its meta data
-    """
-    test_file = "test.pkl"
-    """
-    default pickle file name of test set and its meta data
-    """
 
     def __init__(
         self,
@@ -65,30 +56,11 @@ class MNIST(VisionDataset):
         timeout: int = 500,
     ):
         r"""
-        initialization:
-
-        1. check root path and target file (train or test)
-        2. check target file exists
-
-           * if exists:
-
-             * load pickle file as meta-data and data in MNIST dataset
-
-           * else:
-
-             * if download:
-
-               a. load all raw datas (both train and test set) by url
-               b. process raw data ( idx3/idx1 -> dict (meta-data) ,numpy.array (data) )
-               c. save meta-data and data as pickle file
-               d. load pickle file as meta-data and data in MNIST dataset
-
         :param root: path for mnist dataset downloading or loading, if ``None``,
             set ``root`` to the ``_default_root``
         :param train: if ``True``, loading trainingset, else loading test set
-        :param download: after checking the target files existence, if target files do not
-            exists and download sets to ``True``, download raw files and process,
-            then load, otherwise raise ValueError, default is True
+        :param download: if raw files do not exists and download sets to ``True``,
+            download raw files and process, otherwise raise ValueError, default is True
 
         """
         super().__init__(root, order=("image", "image_category"))
@@ -105,28 +77,14 @@ class MNIST(VisionDataset):
             if not os.path.exists(self.root):
                 raise ValueError("dir %s does not exist" % self.root)
 
-        # choose the target pickle file
-        if train:
-            self.target_file = os.path.join(self.root, self.train_file)
-        else:
-            self.target_file = os.path.join(self.root, self.test_file)
-
-        # check existence of target pickle file, if exists load the
-        # pickle file no matter what download is set
-        if os.path.exists(self.target_file):
-            self._meta_data, self.arrays = self._load_file(self.target_file)
-        elif self._check_raw_files():
-            self.process()
-            self._meta_data, self.arrays = self._load_file(self.target_file)
-        else:
-            if download:
+        if self._check_raw_files():
+            self.process(train)
+        elif download:
             self.download()
-                self._meta_data, self.arrays = self._load_file(self.target_file)
+            self.process(train)
         else:
             raise ValueError(
-                    "dir does not contain target file\
-                        %s,please set download=True"
-                    % (self.target_file)
+                "root does not contain valid raw files, please set download=True"
             )
 
     def __getitem__(self, index: int) -> Tuple:
@@ -143,10 +101,6 @@ class MNIST(VisionDataset):
     def meta(self):
         return self._meta_data
 
-    def _load_file(self, target_file):
-        with open(target_file, "rb") as f:
-            return pickle.load(f)
-
     def _check_raw_files(self):
         return all(
             [
@@ -159,45 +113,35 @@ class MNIST(VisionDataset):
         for file_name, md5 in zip(self.raw_file_name, self.raw_file_md5):
             url = self.url_path + file_name
             load_raw_data_from_url(url, file_name, md5, self.root, self.timeout)
-        self.process()
 
-    def process(self):
+    def process(self, train):
         # load raw files and transform them into meta data and datasets Tuple(np.array)
-        logger.info("process raw data ...")
-        meta_data_images_train, images_train = parse_idx3(
+        logger.info("process the raw files of %s set...", "train" if train else "test")
+        if train:
+            meta_data_images, images = parse_idx3(
                 os.path.join(self.root, self.raw_file_name[0])
             )
-        meta_data_labels_train, labels_train = parse_idx1(
+            meta_data_labels, labels = parse_idx1(
                 os.path.join(self.root, self.raw_file_name[1])
             )
-        meta_data_images_test, images_test = parse_idx3(
+        else:
+            meta_data_images, images = parse_idx3(
                 os.path.join(self.root, self.raw_file_name[2])
             )
-        meta_data_labels_test, labels_test = parse_idx1(
+            meta_data_labels, labels = parse_idx1(
                 os.path.join(self.root, self.raw_file_name[3])
             )
 
-        meta_data_train = {
-            "images": meta_data_images_train,
-            "labels": meta_data_labels_train,
+        self._meta_data = {
+            "images": meta_data_images,
+            "labels": meta_data_labels,
         }
-        meta_data_test = {
-            "images": meta_data_images_test,
-            "labels": meta_data_labels_test,
-        }
-        dataset_train = (images_train, labels_train)
-        dataset_test = (images_test, labels_test)
-
-        # save both training set and test set as pickle files
-        with open(os.path.join(self.root, self.train_file), "wb") as f:
-            pickle.dump((meta_data_train, dataset_train), f, pickle.HIGHEST_PROTOCOL)
-        with open(os.path.join(self.root, self.test_file), "wb") as f:
-            pickle.dump((meta_data_test, dataset_test), f, pickle.HIGHEST_PROTOCOL)
+        self.arrays = (images, labels.astype(np.int32))
 
 
 def parse_idx3(idx3_file):
     # parse idx3 file to meta data and data in numpy array (images)
-    logger.debug("parse idx3 file %s ..." % idx3_file)
+    logger.debug("parse idx3 file %s ...", idx3_file)
     assert idx3_file.endswith(".gz")
     with gzip.open(idx3_file, "rb") as f:
         bin_data = f.read()
@@ -223,7 +167,7 @@ def parse_idx3(idx3_file):
 
 def parse_idx1(idx1_file):
     # parse idx1 file to meta data and data in numpy array (labels)
-    logger.debug("parse idx1 file %s ..." % idx1_file)
+    logger.debug("parse idx1 file %s ...", idx1_file)
     assert idx1_file.endswith(".gz")
     with gzip.open(idx1_file, "rb") as f:
         bin_data = f.read()

python_module/megengine/data/dataset/vision/utils.py

@@ -32,7 +32,7 @@ def load_raw_data_from_url(
 ):
     cached_file = os.path.join(raw_data_dir, filename)
     logger.debug(
-        "load_raw_data_from_url: downloading to or using cached %s ..." % cached_file
+        "load_raw_data_from_url: downloading to or using cached %s ...", cached_file
     )
     if not os.path.exists(cached_file):
         if is_distributed():
@@ -45,7 +45,7 @@ def load_raw_data_from_url(
     else:
         md5 = calculate_md5(cached_file)
     if target_md5 == md5:
-        logger.debug("%s exists with correct md5: %s" % (filename, target_md5))
+        logger.debug("%s exists with correct md5: %s", filename, target_md5)
     else:
         os.remove(cached_file)
         raise RuntimeError("{} exists but fail to match md5".format(filename))

python_module/megengine/data/dataset/vision/voc.py

@@ -77,13 +77,13 @@ class PascalVOC(VisionDataset):
                 if "aug" in self.image_set:
                     mask = cv2.imread(self.masks[index], cv2.IMREAD_GRAYSCALE)
                 else:
-                    mask = np.array(cv2.imread(self.masks[index], cv2.IMREAD_COLOR))
+                    mask = cv2.imread(self.masks[index], cv2.IMREAD_COLOR)
                     mask = self._trans_mask(mask)
                 mask = mask[:, :, np.newaxis]
                 target.append(mask)
-            # elif k == "boxes":
-            #     boxes = self.parse_voc_xml(ET.parse(self.annotations[index]).getroot())
-            #     target.append(boxes)
+            elif k == "boxes":
+                boxes = self.parse_voc_xml(ET.parse(self.annotations[index]).getroot())
+                target.append(boxes)
             elif k == "info":
                 if image is None:
                     image = cv2.imread(self.images[index], cv2.IMREAD_COLOR)
@@ -104,7 +104,7 @@ class PascalVOC(VisionDataset):
             label[
                 (mask[:, :, 0] == b) & (mask[:, :, 1] == g) & (mask[:, :, 2] == r)
             ] = i
-        return label.astype("uint8")
+        return label.astype(np.uint8)
 
     def parse_voc_xml(self, node):
         voc_dict = {}