{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Mask R-CNN - Train on Shapes Dataset\n", "\n", "\n", "This notebook shows how to train Mask R-CNN on your own dataset. To keep things simple we use a synthetic dataset of shapes (squares, triangles, and circles) which enables fast training. You'd still need a GPU, though, because the network backbone is a Resnet101, which would be too slow to train on a CPU. On a GPU, you can start to get okay-ish results in a few minutes, and good results in less than an hour.\n", "\n", "The code of the *Shapes* dataset is included below. It generates images on the fly, so it doesn't require downloading any data. And it can generate images of any size, so we pick a small image size to train faster. " ] }, { "cell_type": "code", "execution_count": 1, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "Using TensorFlow backend.\n" ] } ], "source": [ "import os\n", "import sys\n", "import random\n", "import math\n", "import re\n", "import time\n", "import numpy as np\n", "import cv2\n", "import matplotlib\n", "import matplotlib.pyplot as plt\n", "\n", "# Root directory of the project\n", "ROOT_DIR = os.path.abspath(\"../../\")\n", "\n", "# Import Mask RCNN\n", "sys.path.append(ROOT_DIR) # To find local version of the library\n", "from mrcnn.config import Config\n", "from mrcnn import utils\n", "import mrcnn.model as modellib\n", "from mrcnn import visualize\n", "from mrcnn.model import log\n", "\n", "%matplotlib inline \n", "\n", "# Directory to save logs and trained model\n", "MODEL_DIR = os.path.join(ROOT_DIR, \"logs\")\n", "\n", "# Local path to trained weights file\n", "COCO_MODEL_PATH = os.path.join(ROOT_DIR, \"mask_rcnn_coco.h5\")\n", "# Download COCO trained weights from Releases if needed\n", "if not os.path.exists(COCO_MODEL_PATH):\n", " utils.download_trained_weights(COCO_MODEL_PATH)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Configurations" ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "\n", "Configurations:\n", "BACKBONE_SHAPES [[32 32]\n", " [16 16]\n", " [ 8 8]\n", " [ 4 4]\n", " [ 2 2]]\n", "BACKBONE_STRIDES [4, 8, 16, 32, 64]\n", "BATCH_SIZE 8\n", "BBOX_STD_DEV [ 0.1 0.1 0.2 0.2]\n", "DETECTION_MAX_INSTANCES 100\n", "DETECTION_MIN_CONFIDENCE 0.5\n", "DETECTION_NMS_THRESHOLD 0.3\n", "GPU_COUNT 1\n", "IMAGES_PER_GPU 8\n", "IMAGE_MAX_DIM 128\n", "IMAGE_MIN_DIM 128\n", "IMAGE_PADDING True\n", "IMAGE_SHAPE [128 128 3]\n", "LEARNING_MOMENTUM 0.9\n", "LEARNING_RATE 0.002\n", "MASK_POOL_SIZE 14\n", "MASK_SHAPE [28, 28]\n", "MAX_GT_INSTANCES 100\n", "MEAN_PIXEL [ 123.7 116.8 103.9]\n", "MINI_MASK_SHAPE (56, 56)\n", "NAME SHAPES\n", "NUM_CLASSES 4\n", "POOL_SIZE 7\n", "POST_NMS_ROIS_INFERENCE 1000\n", "POST_NMS_ROIS_TRAINING 2000\n", "ROI_POSITIVE_RATIO 0.33\n", "RPN_ANCHOR_RATIOS [0.5, 1, 2]\n", "RPN_ANCHOR_SCALES (8, 16, 32, 64, 128)\n", "RPN_ANCHOR_STRIDE 2\n", "RPN_BBOX_STD_DEV [ 0.1 0.1 0.2 0.2]\n", "RPN_TRAIN_ANCHORS_PER_IMAGE 256\n", "STEPS_PER_EPOCH 100\n", "TRAIN_ROIS_PER_IMAGE 32\n", "USE_MINI_MASK True\n", "USE_RPN_ROIS True\n", "VALIDATION_STEPS 50\n", "WEIGHT_DECAY 0.0001\n", "\n", "\n" ] } ], "source": [ "class ShapesConfig(Config):\n", " \"\"\"Configuration for training on the toy shapes dataset.\n", " Derives from the base Config class and overrides values specific\n", " to the toy shapes dataset.\n", " \"\"\"\n", " # Give the configuration a recognizable name\n", " NAME = \"shapes\"\n", "\n", " # Train on 1 GPU and 8 images per GPU. We can put multiple images on each\n", " # GPU because the images are small. Batch size is 8 (GPUs * images/GPU).\n", " GPU_COUNT = 1\n", " IMAGES_PER_GPU = 8\n", "\n", " # Number of classes (including background)\n", " NUM_CLASSES = 1 + 3 # background + 3 shapes\n", "\n", " # Use small images for faster training. Set the limits of the small side\n", " # the large side, and that determines the image shape.\n", " IMAGE_MIN_DIM = 128\n", " IMAGE_MAX_DIM = 128\n", "\n", " # Use smaller anchors because our image and objects are small\n", " RPN_ANCHOR_SCALES = (8, 16, 32, 64, 128) # anchor side in pixels\n", "\n", " # Reduce training ROIs per image because the images are small and have\n", " # few objects. Aim to allow ROI sampling to pick 33% positive ROIs.\n", " TRAIN_ROIS_PER_IMAGE = 32\n", "\n", " # Use a small epoch since the data is simple\n", " STEPS_PER_EPOCH = 100\n", "\n", " # use small validation steps since the epoch is small\n", " VALIDATION_STEPS = 5\n", " \n", "config = ShapesConfig()\n", "config.display()" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Notebook Preferences" ] }, { "cell_type": "code", "execution_count": 3, "metadata": { "collapsed": true }, "outputs": [], "source": [ "def get_ax(rows=1, cols=1, size=8):\n", " \"\"\"Return a Matplotlib Axes array to be used in\n", " all visualizations in the notebook. Provide a\n", " central point to control graph sizes.\n", " \n", " Change the default size attribute to control the size\n", " of rendered images\n", " \"\"\"\n", " _, ax = plt.subplots(rows, cols, figsize=(size*cols, size*rows))\n", " return ax" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Dataset\n", "\n", "Create a synthetic dataset\n", "\n", "Extend the Dataset class and add a method to load the shapes dataset, `load_shapes()`, and override the following methods:\n", "\n", "* load_image()\n", "* load_mask()\n", "* image_reference()" ] }, { "cell_type": "code", "execution_count": 4, "metadata": { "collapsed": true }, "outputs": [], "source": [ "class ShapesDataset(utils.Dataset):\n", " \"\"\"Generates the shapes synthetic dataset. The dataset consists of simple\n", " shapes (triangles, squares, circles) placed randomly on a blank surface.\n", " The images are generated on the fly. No file access required.\n", " \"\"\"\n", "\n", " def load_shapes(self, count, height, width):\n", " \"\"\"Generate the requested number of synthetic images.\n", " count: number of images to generate.\n", " height, width: the size of the generated images.\n", " \"\"\"\n", " # Add classes\n", " self.add_class(\"shapes\", 1, \"square\")\n", " self.add_class(\"shapes\", 2, \"circle\")\n", " self.add_class(\"shapes\", 3, \"triangle\")\n", "\n", " # Add images\n", " # Generate random specifications of images (i.e. color and\n", " # list of shapes sizes and locations). This is more compact than\n", " # actual images. Images are generated on the fly in load_image().\n", " for i in range(count):\n", " bg_color, shapes = self.random_image(height, width)\n", " self.add_image(\"shapes\", image_id=i, path=None,\n", " width=width, height=height,\n", " bg_color=bg_color, shapes=shapes)\n", "\n", " def load_image(self, image_id):\n", " \"\"\"Generate an image from the specs of the given image ID.\n", " Typically this function loads the image from a file, but\n", " in this case it generates the image on the fly from the\n", " specs in image_info.\n", " \"\"\"\n", " info = self.image_info[image_id]\n", " bg_color = np.array(info['bg_color']).reshape([1, 1, 3])\n", " image = np.ones([info['height'], info['width'], 3], dtype=np.uint8)\n", " image = image * bg_color.astype(np.uint8)\n", " for shape, color, dims in info['shapes']:\n", " image = self.draw_shape(image, shape, dims, color)\n", " return image\n", "\n", " def image_reference(self, image_id):\n", " \"\"\"Return the shapes data of the image.\"\"\"\n", " info = self.image_info[image_id]\n", " if info[\"source\"] == \"shapes\":\n", " return info[\"shapes\"]\n", " else:\n", " super(self.__class__).image_reference(self, image_id)\n", "\n", " def load_mask(self, image_id):\n", " \"\"\"Generate instance masks for shapes of the given image ID.\n", " \"\"\"\n", " info = self.image_info[image_id]\n", " shapes = info['shapes']\n", " count = len(shapes)\n", " mask = np.zeros([info['height'], info['width'], count], dtype=np.uint8)\n", " for i, (shape, _, dims) in enumerate(info['shapes']):\n", " mask[:, :, i:i+1] = self.draw_shape(mask[:, :, i:i+1].copy(),\n", " shape, dims, 1)\n", " # Handle occlusions\n", " occlusion = np.logical_not(mask[:, :, -1]).astype(np.uint8)\n", " for i in range(count-2, -1, -1):\n", " mask[:, :, i] = mask[:, :, i] * occlusion\n", " occlusion = np.logical_and(occlusion, np.logical_not(mask[:, :, i]))\n", " # Map class names to class IDs.\n", " class_ids = np.array([self.class_names.index(s[0]) for s in shapes])\n", " return mask.astype(np.bool), class_ids.astype(np.int32)\n", "\n", " def draw_shape(self, image, shape, dims, color):\n", " \"\"\"Draws a shape from the given specs.\"\"\"\n", " # Get the center x, y and the size s\n", " x, y, s = dims\n", " if shape == 'square':\n", " cv2.rectangle(image, (x-s, y-s), (x+s, y+s), color, -1)\n", " elif shape == \"circle\":\n", " cv2.circle(image, (x, y), s, color, -1)\n", " elif shape == \"triangle\":\n", " points = np.array([[(x, y-s),\n", " (x-s/math.sin(math.radians(60)), y+s),\n", " (x+s/math.sin(math.radians(60)), y+s),\n", " ]], dtype=np.int32)\n", " cv2.fillPoly(image, points, color)\n", " return image\n", "\n", " def random_shape(self, height, width):\n", " \"\"\"Generates specifications of a random shape that lies within\n", " the given height and width boundaries.\n", " Returns a tuple of three valus:\n", " * The shape name (square, circle, ...)\n", " * Shape color: a tuple of 3 values, RGB.\n", " * Shape dimensions: A tuple of values that define the shape size\n", " and location. Differs per shape type.\n", " \"\"\"\n", " # Shape\n", " shape = random.choice([\"square\", \"circle\", \"triangle\"])\n", " # Color\n", " color = tuple([random.randint(0, 255) for _ in range(3)])\n", " # Center x, y\n", " buffer = 20\n", " y = random.randint(buffer, height - buffer - 1)\n", " x = random.randint(buffer, width - buffer - 1)\n", " # Size\n", " s = random.randint(buffer, height//4)\n", " return shape, color, (x, y, s)\n", "\n", " def random_image(self, height, width):\n", " \"\"\"Creates random specifications of an image with multiple shapes.\n", " Returns the background color of the image and a list of shape\n", " specifications that can be used to draw the image.\n", " \"\"\"\n", " # Pick random background color\n", " bg_color = np.array([random.randint(0, 255) for _ in range(3)])\n", " # Generate a few random shapes and record their\n", " # bounding boxes\n", " shapes = []\n", " boxes = []\n", " N = random.randint(1, 4)\n", " for _ in range(N):\n", " shape, color, dims = self.random_shape(height, width)\n", " shapes.append((shape, color, dims))\n", " x, y, s = dims\n", " boxes.append([y-s, x-s, y+s, x+s])\n", " # Apply non-max suppression wit 0.3 threshold to avoid\n", " # shapes covering each other\n", " keep_ixs = utils.non_max_suppression(np.array(boxes), np.arange(N), 0.3)\n", " shapes = [s for i, s in enumerate(shapes) if i in keep_ixs]\n", " return bg_color, shapes" ] }, { "cell_type": "code", "execution_count": 5, "metadata": { "collapsed": true }, "outputs": [], "source": [ "# Training dataset\n", "dataset_train = ShapesDataset()\n", "dataset_train.load_shapes(500, config.IMAGE_SHAPE[0], config.IMAGE_SHAPE[1])\n", "dataset_train.prepare()\n", "\n", "# Validation dataset\n", "dataset_val = ShapesDataset()\n", "dataset_val.load_shapes(50, config.IMAGE_SHAPE[0], config.IMAGE_SHAPE[1])\n", "dataset_val.prepare()" ] }, { "cell_type": "code", "execution_count": 6, "metadata": {}, "outputs": [ { "data": { "image/png": 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"text/plain": [ "" ] }, "metadata": {}, "output_type": "display_data" } ], "source": [ "# Load and display random samples\n", "image_ids = np.random.choice(dataset_train.image_ids, 4)\n", "for image_id in image_ids:\n", " image = dataset_train.load_image(image_id)\n", " mask, class_ids = dataset_train.load_mask(image_id)\n", " visualize.display_top_masks(image, mask, class_ids, dataset_train.class_names)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Ceate Model" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "collapsed": true }, "outputs": [], "source": [ "# Create model in training mode\n", "model = modellib.MaskRCNN(mode=\"training\", config=config,\n", " model_dir=MODEL_DIR)" ] }, { "cell_type": "code", "execution_count": 7, "metadata": { "collapsed": true, "scrolled": false }, "outputs": [], "source": [ "# Which weights to start with?\n", "init_with = \"coco\" # imagenet, coco, or last\n", "\n", "if init_with == \"imagenet\":\n", " model.load_weights(model.get_imagenet_weights(), by_name=True)\n", "elif init_with == \"coco\":\n", " # Load weights trained on MS COCO, but skip layers that\n", " # are different due to the different number of classes\n", " # See README for instructions to download the COCO weights\n", " model.load_weights(COCO_MODEL_PATH, by_name=True,\n", " exclude=[\"mrcnn_class_logits\", \"mrcnn_bbox_fc\", \n", " \"mrcnn_bbox\", \"mrcnn_mask\"])\n", "elif init_with == \"last\":\n", " # Load the last model you trained and continue training\n", " model.load_weights(model.find_last()[1], by_name=True)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Training\n", "\n", "Train in two stages:\n", "1. Only the heads. Here we're freezing all the backbone layers and training only the randomly initialized layers (i.e. the ones that we didn't use pre-trained weights from MS COCO). To train only the head layers, pass `layers='heads'` to the `train()` function.\n", "\n", "2. Fine-tune all layers. For this simple example it's not necessary, but we're including it to show the process. Simply pass `layers=\"all` to train all layers." ] }, { "cell_type": "code", "execution_count": 8, "metadata": { "scrolled": false }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Checkpoint Path: /deepmatter/mask_rcnn/logs/shapes2017102802/mask_rcnn_{epoch:04d}.h5\n", "Starting at epoch 0. LR=0.002\n", "\n", "Selecting layers to train\n", "fpn_c5p5 (Conv2D)\n", "fpn_c4p4 (Conv2D)\n", "fpn_c3p3 (Conv2D)\n", "fpn_c2p2 (Conv2D)\n", "fpn_p5 (Conv2D)\n", "fpn_p2 (Conv2D)\n", "fpn_p3 (Conv2D)\n", "fpn_p4 (Conv2D)\n", "In model: rpn_model\n", " rpn_conv_shared (Conv2D)\n", " rpn_class_raw (Conv2D)\n", " rpn_bbox_pred (Conv2D)\n", "mrcnn_mask_conv1 (TimeDistributed)\n", "mrcnn_mask_bn1 (TimeDistributed)\n", "mrcnn_mask_conv2 (TimeDistributed)\n", "mrcnn_mask_bn2 (TimeDistributed)\n", "mrcnn_class_conv1 (TimeDistributed)\n", "mrcnn_class_bn1 (TimeDistributed)\n", "mrcnn_mask_conv3 (TimeDistributed)\n", "mrcnn_mask_bn3 (TimeDistributed)\n", "mrcnn_class_conv2 (TimeDistributed)\n", "mrcnn_class_bn2 (TimeDistributed)\n", "mrcnn_mask_conv4 (TimeDistributed)\n", "mrcnn_mask_bn4 (TimeDistributed)\n", "mrcnn_bbox_fc (TimeDistributed)\n", "mrcnn_mask_deconv (TimeDistributed)\n", "mrcnn_class_logits (TimeDistributed)\n", "mrcnn_mask (TimeDistributed)\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ "/usr/local/lib/python3.5/dist-packages/tensorflow/python/ops/gradients_impl.py:95: UserWarning: Converting sparse IndexedSlices to a dense Tensor of unknown shape. This may consume a large amount of memory.\n", " \"Converting sparse IndexedSlices to a dense Tensor of unknown shape. \"\n", "/usr/local/lib/python3.5/dist-packages/keras/engine/training.py:1987: UserWarning: Using a generator with `use_multiprocessing=True` and multiple workers may duplicate your data. Please consider using the`keras.utils.Sequence class.\n", " UserWarning('Using a generator with `use_multiprocessing=True`'\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Epoch 1/1\n", "100/100 [==============================] - 73s - loss: 2.2164 - rpn_class_loss: 0.0242 - rpn_bbox_loss: 1.0638 - mrcnn_class_loss: 0.2426 - mrcnn_bbox_loss: 0.3006 - mrcnn_mask_loss: 0.2385 - val_loss: 1.8454 - val_rpn_class_loss: 0.0232 - val_rpn_bbox_loss: 0.9971 - val_mrcnn_class_loss: 0.1398 - val_mrcnn_bbox_loss: 0.1343 - val_mrcnn_mask_loss: 0.2042\n" ] } ], "source": [ "# Train the head branches\n", "# Passing layers=\"heads\" freezes all layers except the head\n", "# layers. You can also pass a regular expression to select\n", "# which layers to train by name pattern.\n", "model.train(dataset_train, dataset_val, \n", " learning_rate=config.LEARNING_RATE, \n", " epochs=1, \n", " layers='heads')" ] }, { "cell_type": "code", "execution_count": 9, "metadata": { "scrolled": false }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Checkpoint Path: /deepmatter/mask_rcnn/logs/shapes2017102802/mask_rcnn_{epoch:04d}.h5\n", "Starting at epoch 0. LR=0.0002\n", "\n", "Selecting layers to train\n", "conv1 (Conv2D)\n", "bn_conv1 (BatchNorm)\n", "res2a_branch2a (Conv2D)\n", "bn2a_branch2a (BatchNorm)\n", "res2a_branch2b (Conv2D)\n", "bn2a_branch2b (BatchNorm)\n", "res2a_branch2c (Conv2D)\n", "res2a_branch1 (Conv2D)\n", "bn2a_branch2c (BatchNorm)\n", "bn2a_branch1 (BatchNorm)\n", "res2b_branch2a (Conv2D)\n", "bn2b_branch2a (BatchNorm)\n", "res2b_branch2b (Conv2D)\n", "bn2b_branch2b (BatchNorm)\n", "res2b_branch2c (Conv2D)\n", "bn2b_branch2c (BatchNorm)\n", "res2c_branch2a (Conv2D)\n", "bn2c_branch2a (BatchNorm)\n", "res2c_branch2b (Conv2D)\n", "bn2c_branch2b (BatchNorm)\n", "res2c_branch2c (Conv2D)\n", "bn2c_branch2c (BatchNorm)\n", "res3a_branch2a (Conv2D)\n", "bn3a_branch2a (BatchNorm)\n", "res3a_branch2b (Conv2D)\n", "bn3a_branch2b (BatchNorm)\n", "res3a_branch2c (Conv2D)\n", "res3a_branch1 (Conv2D)\n", "bn3a_branch2c (BatchNorm)\n", "bn3a_branch1 (BatchNorm)\n", "res3b_branch2a (Conv2D)\n", "bn3b_branch2a (BatchNorm)\n", "res3b_branch2b (Conv2D)\n", "bn3b_branch2b (BatchNorm)\n", "res3b_branch2c (Conv2D)\n", "bn3b_branch2c (BatchNorm)\n", "res3c_branch2a (Conv2D)\n", "bn3c_branch2a (BatchNorm)\n", "res3c_branch2b (Conv2D)\n", "bn3c_branch2b (BatchNorm)\n", "res3c_branch2c (Conv2D)\n", "bn3c_branch2c (BatchNorm)\n", "res3d_branch2a (Conv2D)\n", "bn3d_branch2a (BatchNorm)\n", "res3d_branch2b (Conv2D)\n", "bn3d_branch2b (BatchNorm)\n", "res3d_branch2c (Conv2D)\n", "bn3d_branch2c (BatchNorm)\n", "res4a_branch2a (Conv2D)\n", "bn4a_branch2a (BatchNorm)\n", "res4a_branch2b (Conv2D)\n", "bn4a_branch2b (BatchNorm)\n", "res4a_branch2c (Conv2D)\n", "res4a_branch1 (Conv2D)\n", "bn4a_branch2c (BatchNorm)\n", "bn4a_branch1 (BatchNorm)\n", "res4b_branch2a (Conv2D)\n", "bn4b_branch2a (BatchNorm)\n", "res4b_branch2b (Conv2D)\n", "bn4b_branch2b (BatchNorm)\n", "res4b_branch2c (Conv2D)\n", "bn4b_branch2c (BatchNorm)\n", "res4c_branch2a (Conv2D)\n", "bn4c_branch2a (BatchNorm)\n", "res4c_branch2b (Conv2D)\n", "bn4c_branch2b (BatchNorm)\n", "res4c_branch2c (Conv2D)\n", "bn4c_branch2c (BatchNorm)\n", "res4d_branch2a (Conv2D)\n", "bn4d_branch2a (BatchNorm)\n", "res4d_branch2b (Conv2D)\n", "bn4d_branch2b (BatchNorm)\n", "res4d_branch2c (Conv2D)\n", "bn4d_branch2c (BatchNorm)\n", "res4e_branch2a (Conv2D)\n", "bn4e_branch2a (BatchNorm)\n", "res4e_branch2b (Conv2D)\n", "bn4e_branch2b (BatchNorm)\n", "res4e_branch2c (Conv2D)\n", "bn4e_branch2c (BatchNorm)\n", "res4f_branch2a (Conv2D)\n", "bn4f_branch2a (BatchNorm)\n", "res4f_branch2b (Conv2D)\n", "bn4f_branch2b (BatchNorm)\n", "res4f_branch2c (Conv2D)\n", "bn4f_branch2c (BatchNorm)\n", "res4g_branch2a (Conv2D)\n", "bn4g_branch2a (BatchNorm)\n", "res4g_branch2b (Conv2D)\n", "bn4g_branch2b (BatchNorm)\n", "res4g_branch2c (Conv2D)\n", "bn4g_branch2c (BatchNorm)\n", "res4h_branch2a (Conv2D)\n", "bn4h_branch2a (BatchNorm)\n", "res4h_branch2b (Conv2D)\n", "bn4h_branch2b (BatchNorm)\n", "res4h_branch2c (Conv2D)\n", "bn4h_branch2c (BatchNorm)\n", "res4i_branch2a (Conv2D)\n", "bn4i_branch2a (BatchNorm)\n", "res4i_branch2b (Conv2D)\n", "bn4i_branch2b (BatchNorm)\n", "res4i_branch2c (Conv2D)\n", "bn4i_branch2c (BatchNorm)\n", "res4j_branch2a (Conv2D)\n", "bn4j_branch2a (BatchNorm)\n", "res4j_branch2b (Conv2D)\n", "bn4j_branch2b (BatchNorm)\n", "res4j_branch2c (Conv2D)\n", "bn4j_branch2c (BatchNorm)\n", "res4k_branch2a (Conv2D)\n", "bn4k_branch2a (BatchNorm)\n", "res4k_branch2b (Conv2D)\n", "bn4k_branch2b (BatchNorm)\n", "res4k_branch2c (Conv2D)\n", "bn4k_branch2c (BatchNorm)\n", "res4l_branch2a (Conv2D)\n", "bn4l_branch2a (BatchNorm)\n", "res4l_branch2b (Conv2D)\n", "bn4l_branch2b (BatchNorm)\n", "res4l_branch2c (Conv2D)\n", "bn4l_branch2c (BatchNorm)\n", "res4m_branch2a (Conv2D)\n", "bn4m_branch2a (BatchNorm)\n", "res4m_branch2b (Conv2D)\n", "bn4m_branch2b (BatchNorm)\n", "res4m_branch2c (Conv2D)\n", "bn4m_branch2c (BatchNorm)\n", "res4n_branch2a (Conv2D)\n", "bn4n_branch2a (BatchNorm)\n", "res4n_branch2b (Conv2D)\n", "bn4n_branch2b (BatchNorm)\n", "res4n_branch2c (Conv2D)\n", "bn4n_branch2c (BatchNorm)\n", "res4o_branch2a (Conv2D)\n", "bn4o_branch2a (BatchNorm)\n", "res4o_branch2b (Conv2D)\n", "bn4o_branch2b (BatchNorm)\n", "res4o_branch2c (Conv2D)\n", "bn4o_branch2c (BatchNorm)\n", "res4p_branch2a (Conv2D)\n", "bn4p_branch2a (BatchNorm)\n", "res4p_branch2b (Conv2D)\n", "bn4p_branch2b (BatchNorm)\n", "res4p_branch2c (Conv2D)\n", "bn4p_branch2c (BatchNorm)\n", "res4q_branch2a (Conv2D)\n", "bn4q_branch2a (BatchNorm)\n", "res4q_branch2b (Conv2D)\n", "bn4q_branch2b (BatchNorm)\n", "res4q_branch2c (Conv2D)\n", "bn4q_branch2c (BatchNorm)\n", "res4r_branch2a (Conv2D)\n", "bn4r_branch2a (BatchNorm)\n", "res4r_branch2b (Conv2D)\n", "bn4r_branch2b (BatchNorm)\n", "res4r_branch2c (Conv2D)\n", "bn4r_branch2c (BatchNorm)\n", "res4s_branch2a (Conv2D)\n", "bn4s_branch2a (BatchNorm)\n", "res4s_branch2b (Conv2D)\n", "bn4s_branch2b (BatchNorm)\n", "res4s_branch2c (Conv2D)\n", "bn4s_branch2c (BatchNorm)\n", "res4t_branch2a (Conv2D)\n", "bn4t_branch2a (BatchNorm)\n", "res4t_branch2b (Conv2D)\n", "bn4t_branch2b (BatchNorm)\n", "res4t_branch2c (Conv2D)\n", "bn4t_branch2c (BatchNorm)\n", "res4u_branch2a (Conv2D)\n", "bn4u_branch2a (BatchNorm)\n", "res4u_branch2b (Conv2D)\n", "bn4u_branch2b (BatchNorm)\n", "res4u_branch2c (Conv2D)\n", "bn4u_branch2c (BatchNorm)\n", "res4v_branch2a (Conv2D)\n", "bn4v_branch2a (BatchNorm)\n", "res4v_branch2b (Conv2D)\n", "bn4v_branch2b (BatchNorm)\n", "res4v_branch2c (Conv2D)\n", "bn4v_branch2c (BatchNorm)\n", "res4w_branch2a (Conv2D)\n", "bn4w_branch2a (BatchNorm)\n", "res4w_branch2b (Conv2D)\n", "bn4w_branch2b (BatchNorm)\n", "res4w_branch2c (Conv2D)\n", "bn4w_branch2c (BatchNorm)\n", "res5a_branch2a (Conv2D)\n", "bn5a_branch2a (BatchNorm)\n", "res5a_branch2b (Conv2D)\n", "bn5a_branch2b (BatchNorm)\n", "res5a_branch2c (Conv2D)\n", "res5a_branch1 (Conv2D)\n", "bn5a_branch2c (BatchNorm)\n", "bn5a_branch1 (BatchNorm)\n", "res5b_branch2a (Conv2D)\n", "bn5b_branch2a (BatchNorm)\n", "res5b_branch2b (Conv2D)\n", "bn5b_branch2b (BatchNorm)\n", "res5b_branch2c (Conv2D)\n", "bn5b_branch2c (BatchNorm)\n", "res5c_branch2a (Conv2D)\n", "bn5c_branch2a (BatchNorm)\n", "res5c_branch2b (Conv2D)\n", "bn5c_branch2b (BatchNorm)\n", "res5c_branch2c (Conv2D)\n", "bn5c_branch2c (BatchNorm)\n", "fpn_c5p5 (Conv2D)\n", "fpn_c4p4 (Conv2D)\n", "fpn_c3p3 (Conv2D)\n", "fpn_c2p2 (Conv2D)\n", "fpn_p5 (Conv2D)\n", "fpn_p2 (Conv2D)\n", "fpn_p3 (Conv2D)\n", "fpn_p4 (Conv2D)\n", "In model: rpn_model\n", " rpn_conv_shared (Conv2D)\n", " rpn_class_raw (Conv2D)\n", " rpn_bbox_pred (Conv2D)\n", "mrcnn_mask_conv1 (TimeDistributed)\n", "mrcnn_mask_bn1 (TimeDistributed)\n", "mrcnn_mask_conv2 (TimeDistributed)\n", "mrcnn_mask_bn2 (TimeDistributed)\n", "mrcnn_class_conv1 (TimeDistributed)\n", "mrcnn_class_bn1 (TimeDistributed)\n", "mrcnn_mask_conv3 (TimeDistributed)\n", "mrcnn_mask_bn3 (TimeDistributed)\n", "mrcnn_class_conv2 (TimeDistributed)\n", "mrcnn_class_bn2 (TimeDistributed)\n", "mrcnn_mask_conv4 (TimeDistributed)\n", "mrcnn_mask_bn4 (TimeDistributed)\n", "mrcnn_bbox_fc (TimeDistributed)\n", "mrcnn_mask_deconv (TimeDistributed)\n", "mrcnn_class_logits (TimeDistributed)\n", "mrcnn_mask (TimeDistributed)\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ "/usr/local/lib/python3.5/dist-packages/tensorflow/python/ops/gradients_impl.py:95: UserWarning: Converting sparse IndexedSlices to a dense Tensor of unknown shape. This may consume a large amount of memory.\n", " \"Converting sparse IndexedSlices to a dense Tensor of unknown shape. \"\n", "/usr/local/lib/python3.5/dist-packages/keras/engine/training.py:1987: UserWarning: Using a generator with `use_multiprocessing=True` and multiple workers may duplicate your data. Please consider using the`keras.utils.Sequence class.\n", " UserWarning('Using a generator with `use_multiprocessing=True`'\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "Epoch 1/1\n", "100/100 [==============================] - 86s - loss: 11.4006 - rpn_class_loss: 0.0184 - rpn_bbox_loss: 0.8409 - mrcnn_class_loss: 0.1576 - mrcnn_bbox_loss: 0.0902 - mrcnn_mask_loss: 0.1977 - val_loss: 11.4376 - val_rpn_class_loss: 0.0220 - val_rpn_bbox_loss: 1.0068 - val_mrcnn_class_loss: 0.1172 - val_mrcnn_bbox_loss: 0.0683 - val_mrcnn_mask_loss: 0.1278\n" ] } ], "source": [ "# Fine tune all layers\n", "# Passing layers=\"all\" trains all layers. You can also \n", "# pass a regular expression to select which layers to\n", "# train by name pattern.\n", "model.train(dataset_train, dataset_val, \n", " learning_rate=config.LEARNING_RATE / 10,\n", " epochs=2, \n", " layers=\"all\")" ] }, { "cell_type": "code", "execution_count": 10, "metadata": { "collapsed": true }, "outputs": [], "source": [ "# Save weights\n", "# Typically not needed because callbacks save after every epoch\n", "# Uncomment to save manually\n", "# model_path = os.path.join(MODEL_DIR, \"mask_rcnn_shapes.h5\")\n", "# model.keras_model.save_weights(model_path)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Detection" ] }, { "cell_type": "code", "execution_count": 11, "metadata": { "collapsed": true }, "outputs": [], "source": [ "class InferenceConfig(ShapesConfig):\n", " GPU_COUNT = 1\n", " IMAGES_PER_GPU = 1\n", "\n", "inference_config = InferenceConfig()\n", "\n", "# Recreate the model in inference mode\n", "model = modellib.MaskRCNN(mode=\"inference\", \n", " config=inference_config,\n", " model_dir=MODEL_DIR)\n", "\n", "# Get path to saved weights\n", "# Either set a specific path or find last trained weights\n", "# model_path = os.path.join(ROOT_DIR, \".h5 file name here\")\n", "model_path = model.find_last()[1]\n", "\n", "# Load trained weights (fill in path to trained weights here)\n", "assert model_path != \"\", \"Provide path to trained weights\"\n", "print(\"Loading weights from \", model_path)\n", "model.load_weights(model_path, by_name=True)" ] }, { "cell_type": "code", "execution_count": 12, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "original_image shape: (128, 128, 3) min: 108.00000 max: 236.00000\n", "image_meta shape: (12,) min: 0.00000 max: 128.00000\n", "gt_bbox shape: (2, 5) min: 2.00000 max: 102.00000\n", "gt_mask shape: (128, 128, 2) min: 0.00000 max: 1.00000\n" ] }, { "data": { "image/png": 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"text/plain": [ "" ] }, "metadata": {}, "output_type": "display_data" } ], "source": [ "# Test on a random image\n", "image_id = random.choice(dataset_val.image_ids)\n", "original_image, image_meta, gt_class_id, gt_bbox, gt_mask =\\\n", " modellib.load_image_gt(dataset_val, inference_config, \n", " image_id, use_mini_mask=False)\n", "\n", "log(\"original_image\", original_image)\n", "log(\"image_meta\", image_meta)\n", "log(\"gt_class_id\", gt_class_id)\n", "log(\"gt_bbox\", gt_bbox)\n", "log(\"gt_mask\", gt_mask)\n", "\n", "visualize.display_instances(original_image, gt_bbox, gt_mask, gt_class_id, \n", " dataset_train.class_names, figsize=(8, 8))" ] }, { "cell_type": "code", "execution_count": 13, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Processing 1 images\n", "image shape: (128, 128, 3) min: 108.00000 max: 236.00000\n", "molded_images shape: (1, 128, 128, 3) min: -15.70000 max: 132.10000\n", "image_metas shape: (1, 12) min: 0.00000 max: 128.00000\n" ] }, { "data": { "image/png": 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cTVjrIDIpIpvU5UxtzHg+xvVY+dOv4JkQgPz4VravexvPXvEJ4mT28OOtT8X0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\nhmRo6Z1Ul7XMTGEsR3Aci0c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"text/plain": [ "" ] }, "metadata": {}, "output_type": "display_data" } ], "source": [ "results = model.detect([original_image], verbose=1)\n", "\n", "r = results[0]\n", "visualize.display_instances(original_image, r['rois'], r['masks'], r['class_ids'], \n", " dataset_val.class_names, r['scores'], ax=get_ax())" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Evaluation" ] }, { "cell_type": "code", "execution_count": 14, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "mAP: 0.95\n" ] } ], "source": [ "# Compute VOC-Style mAP @ IoU=0.5\n", "# Running on 10 images. Increase for better accuracy.\n", "image_ids = np.random.choice(dataset_val.image_ids, 10)\n", "APs = []\n", "for image_id in image_ids:\n", " # Load image and ground truth data\n", " image, image_meta, gt_class_id, gt_bbox, gt_mask =\\\n", " modellib.load_image_gt(dataset_val, inference_config,\n", " image_id, use_mini_mask=False)\n", " molded_images = np.expand_dims(modellib.mold_image(image, inference_config), 0)\n", " # Run object detection\n", " results = model.detect([image], verbose=0)\n", " r = results[0]\n", " # Compute AP\n", " AP, precisions, recalls, overlaps =\\\n", " utils.compute_ap(gt_bbox, gt_class_id, gt_mask,\n", " r[\"rois\"], r[\"class_ids\"], r[\"scores\"], r['masks'])\n", " APs.append(AP)\n", " \n", "print(\"mAP: \", np.mean(APs))" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "collapsed": true }, "outputs": [], "source": [] } ], "metadata": { "kernelspec": { "display_name": "Python 3", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.6.2" } }, "nbformat": 4, "nbformat_minor": 2 }